Hands-on Activity:
    Build Your Own Molecule

    Relevant National Science Education Standards and
    New Jersey State Science Curriculum Standards

    This activity lets the students get creative. It is also an activity well suited for students with body-kinesthetic intelligence as described in the theory of multiple intelligences. For this activity you will need molecular modeling kits, enough for each student. You will also need access to standard chemical references such as the Merck Index or the CRC Handbook of Chemistry and Physics. If those are unavailable, a catalog from a fine chemical supply house can be used. Most supply houses give their catalogs away for free, and some are available on-line, including:

      Aldrich
      Alfa Aesar
      Mallinckrodt Baker

    As this exercise deals with designing new molecules, it is meant to tie-in closely with the reading The Important Lesson. It also ties in nicely with the laboratory activity Designer Molecules: Esterification in which the students design and build real molecules, not just models.

    Building the Molecules

    Since this activity is meant to put them in the shoes of the scientist as a builder of molecules, you may want to start by showing them models of salicylic acid and acetic anhydride. Then rearrange the atoms in your models to make acetylsalicylic acid and acetic acid. This will reinforce the idea of building molecules with specific designs for specific purposes.

    Before the students can build their molecules, you may have to explain the "rules" to them. Let them know that a black ball is a carbon atom, a red ball an oxygen atom, and so forth and that each color atom has a certain valency: the black carbons should have four bonds, the blue nitrogen three, the red oxygen two, and the white hydrogen one. Show them how to form single and double bonds using the models. Make sure they know that a double bond counts as two of an atom's available valences! You might want to use this opportunity to reinforce that each bond is a pair of electrons shared by two atoms, and that each double bond is four shared atoms.

    To keep things manageable, and to make sure you have enough supplies for all students, it is a good idea to impose limits on how many atoms the students can use in their molecules. For example, you might give each student only a certain number of atoms with which to play, with most of them carbon and hydrogen, and smaller numbers of heteroatoms. This will also make their structures more likely to be real molecules. We suggest the following be given to each student:

      10 black, tetravalent atoms to represent carbon
      2 red, divalent atoms to represent oxygen
      2 blue, trivalent atoms to represent nitrogen
      24 white, monovalent atoms to represent hydrogen
      40 single bond connectors
      10 double bond connectors (enough for five double bonds)

    Probably most the atoms in a modeling kit will be tetravalent, even the red and blue ones meant to represent heteroatoms. You have the option of filling in the extra holes in each model heteroatom with modeling clay to achieve the proper valency, or you may challenge your students to learn the valency of oxygen, nitrogen, and hydrogen as part of the game.

    Inspect each molecule that each student makes to make sure that it is chemically sound (that is, that none of them has long chains of oxygen atoms or some other structural improbability). Also check for proper valency of the heteroatoms. Make sure the students know that it is not necessary to use every atom in their kits to make their molecules.

    Let the students figure out the molecular formulas for themselves, as they should be able to count by this point! Then you will work with each student to determine the proper name for the molecules created, and how to draw properly flat structures for the molecules. The students need not learn all the rules of nomenclature or the conventions for drawing structures, just as long as they get a name and picture of their own molecule. They'll need them for the next step in this activity.

    Researching the Molecule

    Once the students have the formulas, names, and structures of the molecules they have built, each student will have to find out whether his or her molecule really exists. If it does exist, the students will then answer a set of questions about the molecule. This will require research in the library or on the Internet. It will be necessary to have access to a fine chemical supply house catalog, and it will be very useful to have access to the other standard chemical references mentioned in the first paragraph.

    If a student makes a molecule that does not exist have that student research a real molecule with a similar structure. As a challenge for advanced classes, after the students have finished their research you may want to present the original nonexistent structure to the class and have students speculate on what properties it would have.

    This portion of the activity also will give you the opportunity to reinforce the connection between the symbols of chemical formulas and equations, macroscopic compounds, and unseen molecules. While these connections seem obvious to a chemist, some students have trouble connecting the three. Learning through research reinforces the idea that their symbolic molecules represent real microscopic molecules, and these microscopic molecules make up real macroscopic materials. (For more on this topic, refer to the tutorial How to Draw Aspirin.)

    Relevant National Science Education Standards

      Unifying Concepts and Processes — In this activity the students build their own systems, their molecules, and learn something about the interaction of its components, the atoms in the molecule, to produce the behavior of the whole molecule.

      Physical Science — The atomic and molecular nature of matter are central to this activity.

      Science and Technology — The activity reinforces that the science of synthetic chemistry is applied to the technology of designing new materials.

    Relevant New Jersey State Science Curriculum Standards

      5.6 The atomic and molecular nature of matter are central to this activity.

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